鉴于输入字数的限制,上一期发布了大多数植物基因组(消息框输入 基因组 即可获得),下面把剩余的也贴出来了。
在拉出大的列表之前,先说一下有了公布的基因组我们能干啥?
1、基因克隆不再成为问题。没有基因组我们可能要找同源基因然后利用保守区设计引物,然后PCR,获得保守区段。但有时候保守区可未必保守,我们研究的物种恰恰在这里不保守,导致PCR失败。但是有了基因组,我们就可以精确设计引物了,确保PCR的模板序列的准确性,大大提高成功的概率!同时有了基因组通过e-PCR,可以保证引物的高特异性!
2、功能基因定位更容易。做QTL等等标记,在有了基因组可以拿到标记之间的基因组序列,进而找到相关的基因,与性状取得联系。
3、利用转录组鉴定相关功能基因更容易。由于有了基因组,可以做有参考转录组,直接获取相关的差异基因,进行分析。
4、基因家族鉴定得以实现。生物体内好多基因都以家族的形式呈现,生物的功能往往是整个家族协调一致调控的结果。通过基因组,可以鉴定家族的所有成员,比较他们序列的差异,研究他们的进化与基因的选择性表达(PS. 基因家族鉴定有需要的可以咨询小编,帮你快速拿SCI)。
5、比较基因组学。可以研究物种间基因组差异,阐明物种进化。
6、研究基因之间的调控。可以获得基因的调控元件,以及邻近基因的相互作用关系,研究基因功能。
还有很多,欢迎补充!
GCA_000737435.1 | Penstemon centranthifolius (eudicots) | 大红钓钟柳 |
GCA_000281005.1 | Penstemon cyananthus (eudicots) | × |
GCA_000280985.1 | Penstemon davidsonii (eudicots) | 钟铃花属的一种蓝紫色小矮花 |
GCA_000280965.1 | Penstemon dissectus (eudicots) | × |
GCA_000281025.1 | Penstemon fruticosus (eudicots) | × |
GCA_000737425.1 | Penstemon grinnellii (eudicots) | 沙棘 |
GCA_001263595.1 | Phalaenopsis equestris (monocots) | 小兰屿蝴蝶兰 |
GCF_000499845.1 | Phaseolus vulgaris (eudicots) | 菜豆 |
GCA_001517995.1 | Phaseolus vulgaris (eudicots) | 菜豆 |
GCF_000413155.1 | Phoenix dactylifera (date palm) | 枣椰树 |
GCA_000181215.2 | Phoenix dactylifera (date palm) | 枣椰树 |
GCA_000181215.1 | Phoenix dactylifera (date palm) | 枣椰树 |
GCF_000002425.2 | Physcomitrella patens (mosses) | 小立碗藓 |
GCF_000002425.3 | Physcomitrella patens (mosses) | 小立碗藓 |
GCA_000411955.3 | Picea glauca (white spruce) | 白云杉 |
GCA_000411955.5 | Picea glauca (white spruce) | 白云杉 |
GCA_001687225.1 | Picea glauca (white spruce) | 白云杉 |
GCA_000411955.4 | Picea glauca (white spruce) | 白云杉 |
GCA_000411955.1 | Picea glauca (white spruce) | 白云杉 |
GCA_000966675.1 | Picea glauca (white spruce) | 白云杉 |
GCA_000411955.2 | Picea glauca (white spruce) | 白云杉 |
GCA_001447015.2 | Pinus lambertiana (sugar pine) | 糖松 |
GCA_001447015.1 | Pinus lambertiana (sugar pine) | 糖松 |
GCA_000404065.1 | Pinus taeda (loblolly pine) | 厚皮刺果松 |
GCA_000404065.2 | Pinus taeda (loblolly pine) | 厚皮刺果松 |
GCF_000495115.1 | Populus euphratica (Euphrates poplar) | 幼发拉底河杨树 |
GCF_000002775.3 | Populus trichocarpa (black cottonwood) | 黑三角叶杨 |
GCF_000002775.1 | Populus trichocarpa (black cottonwood) | 黑三角叶杨 |
GCF_000002775.2 | Populus trichocarpa (black cottonwood) | 黑三角叶杨 |
GCA_000788445.1 | Primula veris (cowslip) | 黄花九轮草 |
GCA_001077355.1 | Primula vulgaris (eudicots) | 报春花 |
GCA_001403715.1 | Primula vulgaris (eudicots) | 报春花 |
GCF_000346735.1 | Prunus mume (Japanese apricot) | 梅花 |
GCA_000218195.1 | Prunus persica (peach) | 桃 |
GCA_000218215.1 | Prunus persica (peach) | 桃 |
GCA_000218175.1 | Prunus persica (peach) | 桃 |
GCF_000346465.1 | Prunus persica (peach) | 桃 |
GCA_001517045.1 | Pseudotsuga menziesii (Douglas-fir) | 花旗松 |
GCF_000315295.1 | Pyrus x bretschneideri (Chinese white pear) | 中国白梨 |
GCA_001633185.1 | Quercus lobata (valley oak) | 谷橡木 |
GCA_000769845.1 | Raphanus raphanistrum subsp. raphanistrum (eudicots) | 野萝卜 |
GCA_000801105.2 | Raphanus sativus (radish) | 萝卜 |
GCA_000801105.1 | Raphanus sativus (radish) | 萝卜 |
GCA_000715565.1 | Raphanus sativus (radish) | 萝卜 |
GCA_001047155.1 | Raphanus sativus (radish) | 萝卜 |
GCF_000151685.1 | Ricinus communis (castor bean) | 蓖麻 |
GCA_000151685.1 | Ricinus communis (castor bean) | 蓖麻 |
GCA_001662545.1 | Rosa x damascena (damask rose) | 玫瑰 |
GCA_000218505.1 | Schrenkiella parvula (eudicots) | × |
GCA_001021135.1 | Selaginella kraussiana (club-mosses) | 卷柏 |
GCF_000143415.2 | Selaginella moellendorffii (club-mosses) | 石松类 |
GCF_000143415.1 | Selaginella moellendorffii (club-mosses) | 石松类 |
GCF_000143415.3 | Selaginella moellendorffii (club-mosses) | 石松类 |
GCF_000512975.1 | Sesamum indicum (sesame) | 芝麻 |
GCA_001692995.1 | Sesamum indicum (sesame) | 芝麻 |
GCA_000975565.1 | Sesamum indicum (sesame) | 芝麻 |
GCF_000263155.2 | Setaria italica (foxtail millet) | 谷子 |
GCF_000263155.1 | Setaria italica (foxtail millet) | 谷子 |
GCA_001652605.1 | Setaria italica (foxtail millet) | 谷子 |
GCA_001412135.1 | Silene latifolia subsp. alba (eudicots) | 白花蝇子草 |
GCA_001541825.1 | Silybum marianum (eudicots) | 水飞蓟 |
GCA_000411075.1 | Sisymbrium irio (eudicots) | 水蒜芥 |
GCA_000612985.1 | Solanum arcanum (eudicots) | 野生番茄 |
GCA_001239805.1 | Solanum commersonii (Commerson's wild potato) | 野生土豆 |
GCA_000577655.1 | Solanum habrochaites (eudicots) | 多毛番茄 |
GCF_000188115.3 | Solanum lycopersicum (tomato) | 番茄 |
GCA_000181095.1 | Solanum lycopersicum (tomato) | 番茄 |
GCA_000325825.1 | Solanum lycopersicum (tomato) | 番茄 |
GCF_000188115.1 | Solanum lycopersicum (tomato) | 番茄 |
GCF_000188115.2 | Solanum lycopersicum (tomato) | 番茄 |
GCA_900008105.1 | Solanum lycopersicum (tomato) | 番茄 |
GCA_000787875.1 | Solanum melongena (eggplant) | 茄子 |
GCA_000820945.1 | Solanum pennellii (eudicots) | 野生西红柿 |
GCA_000577875.1 | Solanum pennellii (eudicots) | 野生西红柿 |
GCF_001406875.1 | Solanum pennellii (eudicots) | 野生西红柿 |
GCA_000230315.1 | Solanum pimpinellifolium (currant tomato) | 醋栗番茄 |
GCA_900004685.1 | Solanum tuberosum (potato) | 土豆 |
GCF_000226075.1 | Solanum tuberosum (potato) | 土豆 |
GCA_000003195.2 | Sorghum bicolor (sorghum) | 高粱 |
GCF_000003195.2 | Sorghum bicolor (sorghum) | 高粱 |
GCF_000003195.1 | Sorghum bicolor (sorghum) | 高粱 |
GCA_000236745.2 | Sorghum bicolor (sorghum) | 高粱 |
GCA_000236765.2 | Sorghum bicolor (sorghum) | 高粱 |
GCA_000236725.1 | Sorghum bicolor (sorghum) | 高粱 |
GCA_000236725.2 | Sorghum bicolor (sorghum) | 高粱 |
GCA_000236745.1 | Sorghum bicolor (sorghum) | 高粱 |
GCA_000236765.1 | Sorghum bicolor (sorghum) | 高粱 |
GCA_000510995.2 | Spinacia oleracea (spinach) | 菠菜 |
GCA_000510995.1 | Spinacia oleracea (spinach) | 菠菜 |
GCA_000504445.1 | Spirodela polyrhiza (great duckweed) | 浮萍 |
GCF_000463585.1 | Tarenaya hassleriana (spider flower) | 醉蝶花 |
GCF_000208745.1 | Theobroma cacao (cacao) | 可可 |
GCA_000208745.1 | Theobroma cacao (cacao) | 可可 |
GCF_000403535.1 | Theobroma cacao (cacao) | 可可 |
GCA_000956625.1 | Thlaspi arvense (eudicots) | 菥蓂 |
GCA_000583005.2 | Trifolium pratense (eudicots) | 红花苜蓿 |
GCA_000583005.1 | Trifolium pratense (eudicots) | 红花苜蓿 |
GCA_900079335.1 | Trifolium pratense (eudicots) | 红花苜蓿 |
GCA_000210335.1 | Triticum aestivum (bread wheat) | 面包小麦 |
GCA_000334135.1 | Triticum aestivum (bread wheat) | 面包小麦 |
GCA_001077335.1 | Triticum aestivum (bread wheat) | 面包小麦 |
GCA_000334095.1 | Triticum aestivum (bread wheat) | 面包小麦 |
GCA_000188135.1 | Triticum aestivum (bread wheat) | 面包小麦 |
GCA_000818885.1 | Triticum aestivum (bread wheat) | 面包小麦 |
GCA_001485685.1 | Triticum aestivum (bread wheat) | 面包小麦 |
GCA_000347455.1 | Triticum urartu (monocots) | 乌拉尔图小麦 |
GCA_000775335.1 | Vaccinium macrocarpon (eudicots) | 大果越橘 |
GCA_001375635.1 | Vicia faba (fava bean) | 蚕豆 |
GCF_001190045.1 | Vigna angularis (adzuki bean) | 红豆 |
GCA_000465365.1 | Vigna angularis var. angularis (adzuki bean) | 红豆 |
GCA_001723775.1 | Vigna angularis var. angularis (adzuki bean) | 红豆 |
GCA_000180895.1 | Vigna radiata (mung bean) | 绿豆 |
GCA_001584445.1 | Vigna radiata var. radiata (mung bean) | 绿豆 |
GCA_000741045.1 | Vigna radiata var. radiata (mung bean) | 绿豆 |
GCF_000741045.1 | Vigna radiata var. radiata (mung bean) | 绿豆 |
GCA_001687525.1 | Vigna unguiculata subsp. unguiculata (cowpea) | 豇豆 |
GCA_001562795.1 | Vitis aestivalis (eudicots) | 葡萄- |
GCA_001282645.1 | Vitis cinerea x Vitis riparia (eudicots) | 葡萄 |
GCF_000003745.2 | Vitis vinifera (wine grape) | 葡萄 |
GCF_000003745.3 | Vitis vinifera (wine grape) | 葡萄 |
GCF_000003745.1 | Vitis vinifera (wine grape) | 葡萄 |
GCA_000005005.2 | Zea mays (maize) | 玉米 |
GCA_000223545.1 | Zea mays (maize) | 玉米 |
GCA_000005005.3 | Zea mays (maize) | 玉米 |
GCF_000005005.1 | Zea mays (maize) | 玉米 |
GCA_000005005.1 | Zea mays (maize) | 玉米 |
GCA_000275765.1 | Zea mays (maize) | 玉米 |
GCA_000005005.4 | Zea mays (maize) | 玉米 |
GCA_001644905.1 | Zea mays subsp. mays (maize) | 玉米 |
GCA_000418225.1 | Zizania latifolia (monocots) | 野生种“菰 |
GCF_000826755.1 | Ziziphus jujuba (eudicots) | 枣 |
GCA_001185155.1 | Zostera marina (monocots) | 鳗草 |
GCA_001602275.1 | Zoysia japonica (monocots) | 结缕草 |
GCA_001602295.1 | Zoysia matrella (Manila grass) | 细叶结缕草 |
GCA_001602315.1 | Zoysia pacifica (monocots) | 太平洋结缕草 |